Motif IL_38710.1 Version IL_38710.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8GLP_036 | 8GLP | 0.0000 | 2 | L5 | LSU rRNA | C | 727 | U | 728 | G | 731 | * | C | 938 | G | 939 | cWW | cWW | |
| 2 | IL_2QWY_008 | 2QWY | 0.4198 | 0 | Single stack bend with SAM intercalation | C | SAM-II riboswitch | C | 43 | U | 44 | A | 45 | * | U | 21 | G | 22 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGGG*CG | 1 |
| CUA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGG* | 1 |
| U* | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Single stack bend with SAM intercalation (1)
- (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.42 | Avg 0.21 | Max 0.42
Coloring options: