#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 5 6 7 8 91-92-3
1 IL_1VW3_0451VW30.00000A21S ribosomal RNAA1492U1493*A1515U1516A1517A1518A1519C1520U1521cWWcWW
2 IL_3Q1Q_0023Q1Q0.93901BRNase P RNAU216G217*U61G63A64G65C66G67G68cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AU*AUAAACU1
UG*UGGAGCGG1
Non-Watson-Crick part of the motif
SequenceCounts
*UAAAC1
*GGAGCG1

Release history

Release1.141.151.171.18
Date2014-04-272014-06-202014-09-042014-10-07
StatusNew id, 1 parentExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_39175.1Only in the parent motif
IL_71942.1
Compare
IL_3Q1Q_002IL_1VW3_045

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-R-R-R-cWW
    Heat map statistics
    Min 0.94 | Avg 0.47 | Max 0.94
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.0826 s