Motif IL_39310.1 Version IL_39310.1 of this group appears in releases 3.19 to 3.19
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 4-5 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3CUL_001 | 3CUL | 0.0000 | 1 | C | RNA (92-MER) | C | 22 | A | 23 | G | 24 | G | 25 | * | U | 44 | A | 45 | U | 47 | G | 48 | G | 49 | cWW | cWW | cWB | cWW | |
| 2 | IL_4V88_464 | 4V88 | 0.9673 | 0 | A6 | SSU rRNA | G | 1638 | C | 1639 | C | 1640 | C | 1641 | * | G | 1760 | U | 1761 | A | 1762 | A | 1763 | C | 1764 | cWW | cWW | cSW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGG*UAUUGG | 1 |
| GCCC*GUAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG*AUUG | 1 |
| CC*UAA | 1 |
Release history
| Release | 3.19 |
|---|---|
| Date | 2019-05-31 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cSW-cSH-cWW
- Heat map statistics
- Min 0.97 | Avg 0.48 | Max 0.97
Coloring options: