Motif IL_39928.1 Version IL_39928.1 of this group appears in releases 3.3 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2OZB_001 | 2OZB | 0.0000 | 1 | Single bulged A | C | RNA comprising the 5' Stem-Loop RNA of U4snRNA | U | 24 | G | 26 | * | C | 47 | G | 48 | cWW | cWW |
| 2 | IL_5TBW_018 | 5TBW | 0.8412 | 1 | Single bulged A | 1 | LSU rRNA | C | 577 | G | 579 | * | U | 512 | G | 513 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CG | 1 |
| CAG*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 2 |
- Annotations
-
- Single bulged A (2)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: