#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2break 3 41-42-3
1 IL_2OZB_0012OZB0.23721Single bulged ACU24G26*C47G48cWWcWW
2 IL_7RQB_0627RQB0.19271Single bulged A1AU1489G1491*C1499G1500cWWcWW
3 IL_5J7L_3555J7L0.00001Major groove intercalationDBU65G67*C17G18cWWcWW
4 IL_4WF9_1124WF90.30551Major groove intercalationYU63G65*C15A16cWWcWW
5 IL_4V9F_1014V9F0.33491Major groove intercalation9C64G66*C15G16cWWcWW
6 IL_5TBW_0185TBW0.66681Single bulged A1C577G579*U512G513cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CG3
UAG*CA1
CAG*CG1
CAG*UG1
Non-Watson-Crick part of the motif
SequenceCounts
A*6

Release history

Release3.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Single bulged A (3)
  • Major groove intercalation (3)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.19 | Avg 0.37 | Max 0.84
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