Motif IL_41882.1 Version IL_41882.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3BNN_007 | 3BNN | 0.0000 | 1 | C+D | A site of human ribosome | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | * | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | cWW | ncWWa | cWW | ||
| 2 | IL_3IGI_010 | 3IGI | 0.6932 | 0 | A | Group IIC intron | A | 282 | A | 283 | G | 284 | U | 285 | C | 286 | * | G | 267 | A | 268 | G | 269 | G | 270 | U | 271 | cWW | cWW | tSH | tWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACAAG*CACCC | 1 |
| AAGUC*GAGGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAA*ACC | 1 |
| AGU*AGG | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSH-tWH-cWW
- Heat map statistics
- Min 0.69 | Avg 0.35 | Max 0.69
Coloring options: