Motif IL_42776.2 Version IL_42776.2 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-7 | 3-5 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9H3G_096 | 9H3G | 0.0000 | 0 | A | LSU rRNA | G | 2204 | A | 2205 | A | 2206 | U | 2207 | G | 2208 | * | C | 2233 | OMG | 2234 | C | 2235 | cWW | ntHH | ncSH | cWW | |
| 2 | IL_4PDB_001 | 4PDB | 0.3622 | 0 | Other IL | I | SELEX RNA aptamer | C | 9 | A | 10 | G | 11 | U | 12 | G | 13 | * | C | 28 | A | 29 | G | 30 | cWW | cwW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUG*C(OMG)C | 1 |
| CAGUG*CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAU*(OMG) | 1 |
| AGU*A | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-L-R-cSH-cWW-L
- Heat map statistics
- Min 0.36 | Avg 0.18 | Max 0.36
Coloring options: