Motif IL_43210.1 Version IL_43210.1 of this group appears in releases 3.15 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | 3-5 | 3-6 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4IOA_061 | 4IOA | 0.0000 | 0 | X | LSU rRNA | G | 1503 | G | 1504 | U | 1505 | C | 1506 | A | 1507 | * | U | 1515 | A | 1516 | C | 1517 | cWW | cWW | ncWH | cWW | |||
| 2 | IL_4WF9_114 | 4WF9 | 0.9215 | 0 | Y | 5S rRNA | A | 48 | G | 49 | A | 50 | A | 51 | G | 52 | * | C | 28 | C | 29 | U | 30 | cWW | ncWW | ncSH | ncWB | ncWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUCA*UAC | 1 |
| AGAAG*CCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUC*A | 1 |
| GAA*C | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-bif-cWS-cWW
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: