Motif IL_45289.1 Version IL_45289.1 of this group appears in releases 3.48 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-6 | 1-8 | 2-5 | 2-7 | 3-4 | 6-7 | 6-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_114 | 4WF9 | 0.0000 | 0 | Y | 5S rRNA | C | 28 | C | 29 | U | 30 | * | A | 48 | G | 49 | A | 50 | A | 51 | G | 52 | ncBW | cWW | ncWW | ncSW | cWW | ncSH | |
| 2 | IL_5J7L_021 | 5J7L | 0.7824 | 1 | AA | SSU rRNA | C | 440 | A | 441 | G | 442 | * | C | 492 | A | 493 | G | 494 | A | 496 | G | 497 | cWW | ncWw | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCU*AGAAG | 1 |
| CAG*CAGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*GAA | 1 |
| A*AGAA | 1 |
Release history
| Release | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-bif-cSH-cSW-cWW-cWW
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: