Motif IL_46798.1 Version IL_46798.1 of this group appears in releases 3.3 to 3.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V8P_255 | 4V8P | 0.0000 | 1 | D1 | LSU rRNA | U | 2418 | A | 2419 | G | 2420 | U | 2421 | * | G | 2592 | G | 2593 | G | 2594 | G | 2596 | cWW | tHS | tHS | cWW |
| 2 | IL_4Y4O_203 | 4Y4O | 0.8567 | 1 | 2A | LSU rRNA | C | 846 | G | 848 | A | 849 | C | 850 | * | G | 927 | G | 928 | U | 930 | G | 931 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGU*GGGGG | 1 |
| CUGAC*GGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG*GGG | 1 |
| UGA*GU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tHS-tHS-cWW
- Heat map statistics
- Min 0.86 | Avg 0.43 | Max 0.86
Coloring options: