#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 71-72-63-4
1 IL_4R4V_0084R4V0.00002AVS ribozyme RNAC619||||7_556G620||||7_556G623||||7_556*C637||||7_556A638||||7_556A639||||7_556G640||||7_556cWWtSHcWW
2 IL_4R4V_0024R4V0.00002AVS ribozyme RNAC619G620G623*C637A638A639G640cWWtSHcWW
3 IL_3OXE_0023OXE0.91511Adomain II of glycine riboswitchC70A71G72*C31G32A34G35cWWtSHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGAAG*CAAG2
CAG*CGAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAA*AA2
A*GAA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tSH-R-cWW
    Heat map statistics
    Min 0.92 | Avg 0.41 | Max 0.92
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