Motif IL_48280.2 Version IL_48280.2 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3OXE_002 | 3OXE | 0.0000 | 1 | A | domain II of glycine riboswitch | C | 31 | G | 32 | A | 34 | G | 35 | * | C | 70 | A | 71 | G | 72 | cWW | tHS | cWW |
| 2 | IL_4R4V_002 | 4R4V | 0.9151 | 2 | A | VS ribozyme RNA | C | 637 | A | 638 | A | 639 | G | 640 | * | C | 619 | G | 620 | G | 623 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAG*CAG | 1 |
| CAAG*CGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*A | 1 |
| AA*GAA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-tHS-cWW
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: