Motif IL_49850.1 Version IL_49850.1 of this group appears in releases 3.3 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 6-9 | 6-12 | 7-8 | 7-11 | 8-10 | 9-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_373 | 5TBW | 0 | 0 | Minor groove platform related | AS | 5S rRNA | G | 21 | A | 22 | A | 23 | A | 24 | G | 25 | C | 26 | A | 27 | * | U | 53 | U | 54 | A | 55 | A | 56 | G | 57 | C | 58 | cWW | ncWW | cSW | cWW | cSW | ncSH | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAAGCA*UUAAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAGC*UAAG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Minor groove platform related (1)
- Basepair signature
- cWW-L-R-L-L-L-cWW-cSW-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: