Motif IL_50053.1 Version IL_50053.1 of this group appears in releases 3.58 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6AZ4_001 | 6AZ4 | 0.0000 | 0 | A+B | RNA (32-MER) + RNA (9-mer) | G | 9 | C | 10 | C | 11 | G | 12 | * | C | 32 | C | 1 | cWW | cWW |
| 2 | IL_3V7E_005 | 3V7E | 0.6520 | 4 | C | SAM-I riboswitch | G | 114 | A | 115 | A | 116 | A | 117 | * | U | 96 | C | 101 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCG*CC | 1 |
| GAAA*UCCUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC* | 1 |
| AA*CCUG | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.65 | Avg 0.33 | Max 0.65
Coloring options: