Motif IL_50080.1 Version IL_50080.1 of this group appears in releases 3.3 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-3 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3PDR_001 | 3PDR | 0.0000 | 1 | X | M-box riboswitch (ykoK leader) | C | 21 | G | 22 | * | C | 163 | G | 164 | A | 165 | U | 167 | G | 168 | cWW | cWW |
| 2 | IL_5TBW_010 | 5TBW | 0.9043 | 1 | 1 | LSU rRNA | U | 169 | G | 170 | * | U | 248 | U | 249 | U | 250 | G | 251 | A | 253 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CG*CGAUUG | 1 |
| UG*UUUGUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GAUU | 1 |
| *UUGU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-cWW
- Heat map statistics
- Min 0.90 | Avg 0.45 | Max 0.90
Coloring options: