Motif IL_50986.1 Version IL_50986.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-5 | 3-8 | 3-12 | 4-11 | 5-10 | 6-7 | 6-9 | 8-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5A2Q_067 | 5A2Q | 0 | 3 | 2 | SSU rRNA | U | 1329 | G | 1330 | A | 1332 | U | 1333 | G | 1334 | G | 1335 | * | U | 1492 | C | 1493 | G | 1495 | U | 1496 | A | 1498 | U | 1499 | G | 1500 | cWW | cWH | tHW | ncWS | ncWW | ncWB | cWW | tSH | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGCAUGG*UCUGUGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCAUG*CUGUGAU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWH-cWS-tHW-L-tSW-R-bif-tSH-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: