Motif IL_53206.1 Version IL_53206.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_445 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | G | 1035 | U | 1036 | U | 1037 | U | 1039 | * | A | 1050 | C | 1051 | G | 1052 | C | 1053 | cWW | ncWW | cHW | cWW |
| 2 | IL_8C3A_046 | 8C3A | 0.4605 | 2 | 1 | LSU rRNA | G | 1009 | U | 1010 | U | 1013 | G | 1014 | * | U | 1030 | A | 1031 | A | 1032 | C | 1033 | cWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGU*ACGC | 1 |
| GUCUUG*UAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUG*CG | 1 |
| UCUU*AA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-cWW
- Heat map statistics
- Min 0.46 | Avg 0.23 | Max 0.46
Coloring options: