#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 71-72-53-4
1 IL_3PDR_0023PDR0.00001XM-box riboswitch (ykoK leader)U23A25G26*U159C160U161A162cWWtHScWW
2 IL_3V7E_0053V7E0.80993C SAM-I riboswitchU96G100C101*G114A115A116A117cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUAG*UCUA1
UCCUGC*GAAA1
Non-Watson-Crick part of the motif
SequenceCounts
UA*CU1
CCUG*AA1

Release history

Release3.113.123.133.14
Date2018-10-192018-11-162018-12-142019-01-11
StatusNew id, 2 parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-tHS-cWW
    Heat map statistics
    Min 0.81 | Avg 0.40 | Max 0.81
    Help

    Coloring options:

    IL_3PDR_002:IL_3PDR_002 = 0IL_3PDR_002:IL_3V7E_005 = 0.8099IL_3V7E_005:IL_3PDR_002 = 0.8099IL_3V7E_005:IL_3V7E_005 = 0IL_3PDR_002IL_3V7E_005Discrepancy0.000.200.400.600.80
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