Motif IL_54678.2 Version IL_54678.2 of this group appears in releases 3.48 to 3.61

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2	break		3		4	1-4	2-3
1	IL_7A0S_057	7A0S	0.8058	1	X	LSU rRNA	C	1497	G	1498	*	C	1522	G	1527	cWW	cWW
2	IL_4V9F_073	4V9F	0.0000	3	0	LSU rRNA	A	2095	G	2097	*	C	2647	U	2650	cWW	cWW
3	IL_4WF9_079	4WF9	0.1410	3	X	LSU rRNA	A	2081	G	2083	*	C	2639	U	2642	cWW	cWW
4	IL_5J7L_321	5J7L	0.1457	3	DA	LSU rRNA	A	2054	G	2056	*	C	2612	U	2615	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
ACG*CUAU	2
CG*CUG	1
AAG*CUAU	1

Non-Watson-Crick part of the motif

Sequence	Counts
C*UA	2
*U	1
A*UA	1

Release history

Release	3.48	3.49	3.50	3.51	3.52	3.53	3.54	3.55	3.56	3.57	3.58	3.59	3.60	3.61
Date	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05	2022-02-02	2022-03-02	2022-03-30	2022-04-27	2022-05-25	2022-06-22	2022-07-20	2022-08-17
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (4)
Basepair signature: cWW-cWW
Heat map statistics: Min 0.14 | Avg 0.36 | Max 0.85

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