Motif IL_55482.1 Version IL_55482.1 of this group appears in releases 3.3 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3NDB_006 | 3NDB | 0.0000 | 0 | M | SRP RNA | G | 152 | A | 153 | G | 154 | * | U | 175 | A | 176 | A | 177 | C | 178 | cWW | cWW |
| 2 | IL_4WF9_107 | 4WF9 | 0.7067 | 0 | X | LSU rRNA | G | 2863 | A | 2864 | G | 2865 | * | U | 2891 | G | 2892 | A | 2893 | C | 2894 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAG*UAAC | 1 |
| GAG*UGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*AA | 1 |
| A*GA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-cWW
- Heat map statistics
- Min 0.71 | Avg 0.35 | Max 0.71
Coloring options: