Motif IL_55584.1 Version IL_55584.1 of this group appears in releases 3.6 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_422 | 4V88 | 0.0000 | 0 | A6 | SSU rRNA | C | 708 | C | 709 | U | 710 | U | 711 | G | 712 | * | C | 726 | U | 727 | U | 728 | G | 729 | G | 730 | cWW | ncWW | cwW | cWw | cWW |
| 2 | IL_5XTM_006 | 5XTM | 0.7241 | 2 | D | RNA (47-MER) | G | 8 | A | 9 | U | 10 | A | 13 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUG*CUUGG | 1 |
| GAUGAAA*UAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUU*UUG | 1 |
| AUGAA*AAC | 1 |
Release history
| Release | 3.6 |
|---|---|
| Date | 2018-06-01 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: