#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2break 3 41-42-3
1 IL_1S72_0731S720.000030 LSU rRNAA2095G2097*C2647U2650cWWcWW
2 IL_3O58_1113O580.24203125S ribosomal RNAG2396A2398*U2981C2984cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAG*CUAU1
GAA*UACC1
Non-Watson-Crick part of the motif
SequenceCounts
A*UA1
A*AC1

Release history

Release0.5
Date2011-12-08
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_56029.1Only in the parent motif
IL_53598.1
Compare
IL_1S72_073IL_3O58_111

Children motifs

Child motifCommon motif instancesOnly in IL_56029.1Only in the child motif
IL_86059.1
Compare
IL_1S72_073IL_3O58_111
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.24 | Avg 0.12 | Max 0.24
    Help

    Coloring options:

    IL_1S72_073:IL_1S72_073 = 0IL_1S72_073:IL_3O58_111 = 0.242IL_3O58_111:IL_1S72_073 = 0.242IL_3O58_111:IL_3O58_111 = 0IL_1S72_073IL_3O58_111Discrepancy0.000.050.100.150.20
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