Motif IL_58346.1 Version IL_58346.1 of this group appears in releases 3.48 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 1-2 | 1-11 | 4-7 | 4-10 | 5-6 | 5-9 | 7-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_051 | 5J7L | 0.0000 | 0 | AA | SSU rRNA | G | 1124 | U | 1125 | U | 1126 | G | 1127 | C | 1128 | * | G | 1144 | A | 1145 | A | 1146 | C | 1147 | U | 1148 | C | 1149 | cSH | cWW | cWW | ntSH | cWW | cSW | |
| 2 | IL_7A0S_105 | 7A0S | 0.9140 | 1 | Y | 5S rRNA | G | 46 | A | 48 | C | 49 | U | 50 | G | 51 | * | C | 35 | A | 36 | C | 37 | C | 38 | C | 39 | C | 40 | cWW | ncWW | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGC*GAACUC | 1 |
| GAACUG*CACCCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUG*AACU | 1 |
| AACU*ACCC | 1 |
Release history
| Release | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cSH-R-R-R-L-cWW-cWW
- Heat map statistics
- Min 0.91 | Avg 0.46 | Max 0.91
Coloring options: