Motif IL_59659.1 Version IL_59659.1 of this group appears in releases 3.87 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-9 | 4-8 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5XTM_002 | 5XTM | 0.0000 | 1 | Other IL | B | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 12 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | tSH | cBW | cWW | |
| 2 | IL_8VTW_062 | 8VTW | 0.7199 | 1 | 1A | LSU rRNA | U | 1540 | G | 1541 | A | 1542 | A | 1544 | A | 1545 | C | 1546 | * | G | 1526 | G | 1527 | A | 1528 | A | 1528|||A | G | 1529 | cWW | tSH | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUGAAA*UAACC | 1 |
| UGACAAC*GGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGAA*AAC | 1 |
| GACAA*GAA | 1 |
Release history
| Release | 3.87 |
|---|---|
| Date | 2024-08-14 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: