Motif IL_59863.1 Version IL_59863.1 of this group appears in releases 3.28 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4IOA_099 | 4IOA | 0.0000 | 1 | Multiple bulged bases (H) | X | LSU rRNA | C | 2674 | U | 2675 | * | A | 2690 | C | 2691 | A | 2692 | G | 2694 | cWW | cWW |
| 2 | IL_4Y4O_281 | 4Y4O | 0.1404 | 1 | Multiple bulged bases (H) | 2A | LSU rRNA | C | 2695 | U | 2696 | * | A | 2711 | U | 2712 | A | 2712|||A | G | 2714 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CU*ACAUG | 1 |
| CU*AUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CAU | 1 |
| *UAA | 1 |
Release history
| Release | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (H) (2)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.14 | Avg 0.07 | Max 0.14
Coloring options: