Motif IL_60695.1 Version IL_60695.1 of this group appears in releases 3.2 to 3.16
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4ZT0_003 | 4ZT0 | 0.0904 | 2 | D | tracrRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
| 2 | IL_5B2T_001 | 5B2T | 0.0000 | 2 | A | tracrRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
| 3 | IL_5FQ5_001 | 5FQ5 | 0.0569 | 2 | A | tracrRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
| 4 | IL_5F9R_001 | 5F9R | 0.1183 | 2 | A | tracrRNA | A | 26 | G | 27 | G | 29 | * | C | 58 | A | 59 | A | 60 | G | 61 | U | 63 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAG*CAAGUU | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*AAGU | 4 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.06 | Avg 0.08 | Max 0.13
Coloring options: