Motif IL_62437.1 Version IL_62437.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3PYO_092 | 3PYO | 0.9969 | 2 | A | 23S ribosomal RNA | U | 2687 | U | 2688 | C | 2691 | * | G | 2718 | G | 2719 | U | 2720 | A | 2721 | G | 2722 | cWW | cWW | |
| 2 | IL_2ZJR_097 | 2ZJR | 0.0000 | 2 | X | LSU rRNA | U | 2666 | C | 2667 | C | 2670 | * | G | 2698 | G | 2699 | U | 2700 | A | 2701 | G | 2702 | cWW | ntSH | cWW |
| 3 | IL_3O30_074 | 3O30 | 0.4015 | 0 | 1 | 18S ribosomal RNA | G | 1352 | U | 1353 | G | 1354 | * | U | 1369 | U | 1370 | A | 1371 | U | 1372 | C | 1373 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUCC*GGUAG | 1 |
| UCUCC*GGUAG | 1 |
| GUG*UUAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUC*GUA | 1 |
| CUC*GUA | 1 |
| U*UAU | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_62437.1 | Only in the parent motif |
|---|---|---|---|
| IL_20048.1 Compare | IL_2ZJR_097 | IL_3PYO_092, IL_3O30_074 | IL_3F1H_102 |
Children motifs
| Child motif | Common motif instances | Only in IL_62437.1 | Only in the child motif |
|---|---|---|---|
| IL_41397.1 Compare | IL_2ZJR_097 | IL_3PYO_092, IL_3O30_074 | IL_2QBG_103, IL_3UXR_101 |
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