Motif IL_64564.1 Version IL_64564.1 of this group appears in releases 3.19 to 3.32
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_403 | 4V88 | 0.0000 | 2 | A6 | SSU rRNA | U | 318 | U | 319 | G | 322 | A | 323 | * | U | 345 | G | 346 | cWW | cWW |
| 2 | IL_4V9F_016 | 4V9F | 0.5895 | 0 | 0 | LSU rRNA | A | 602 | A | 603 | G | 604 | C | 605 | * | G | 554 | U | 555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUCGA*UG | 1 |
| AAGC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG* | 1 |
| AG* | 1 |
Release history
| Release | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.59 | Avg 0.29 | Max 0.59
Coloring options: