Motif IL_66380.1 Version IL_66380.1 of this group appears in releases 3.20 to 3.26
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1KXK_001 | 1KXK | 0.8083 | 2 | A | ai5g group II Self-splicing intron | U | 8 | C | 11 | * | G | 61 | G | 62 | cWW | cWW | |
| 2 | IL_6JQ5_002 | 6JQ5 | 0.0792 | 2 | Multiple bulged bases | A | RNA (82-MER) | U | 34 | A | 36 | * | U | 58 | A | 60 | cWW | cWW |
| 3 | IL_6JQ5_005 | 6JQ5 | 0.0796 | 2 | Multiple bulged bases | B | RNA (82-MER) | U | 34 | A | 36 | * | U | 58 | A | 60 | cWW | cWW |
| 4 | IL_6JQ6_005 | 6JQ6 | 0.0000 | 2 | Multiple bulged bases | U | RNA (81-MER) | U | 34 | A | 36 | * | U | 58 | A | 60 | cWW | cWW |
| 5 | IL_6JQ6_002 | 6JQ6 | 0.0000 | 2 | Multiple bulged bases | U | RNA (81-MER) | U | 34||||11_555 | A | 36||||11_555 | * | U | 58||||11_555 | A | 60||||11_555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUA*UUA | 4 |
| UAUC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*U | 4 |
| AU* | 1 |
Release history
| Release | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 |
|---|---|---|---|---|---|---|---|
| Date | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (4)
- (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.06 | Avg 0.29 | Max 0.82
Coloring options: