Motif IL_66745.3 Version IL_66745.3 of this group appears in releases 3.17 to 3.32
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 4-8 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_121 | 5TBW | 0.8146 | 0 | 1 | LSU rRNA | G | 3284 | C | 3285 | G | 3286 | U | 3287 | G | 3288 | * | C | 3162 | A | 3163 | C | 3164 | A | 3165 | C | 3166 | cWW | ncWWa | ncWW | ncWW | ncWW | |
| 2 | IL_3IGI_010 | 3IGI | 0.6523 | 0 | A | Group IIC intron | G | 267 | A | 268 | G | 269 | G | 270 | U | 271 | * | A | 282 | A | 283 | G | 284 | U | 285 | C | 286 | cWW | tHW | tHS | cWW | cWW | |
| 3 | IL_3BNN_006 | 3BNN | 0.0000 | 1 | C+D | A site of human ribosome | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | * | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | cWW | ncBW | cWWa | cWW | ||
| 4 | IL_3BNN_007 | 3BNN | 0.2009 | 1 | D+C | A site of human ribosome | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | * | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CACCC*GACAAG | 2 |
| GCGUG*CACAC | 1 |
| GAGGU*AAGUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACC*ACAA | 2 |
| CGU*ACA | 1 |
| AGG*AGU | 1 |
Release history
| Release | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-tHS-cWW-cWW
- Heat map statistics
- Min 0.20 | Avg 0.49 | Max 0.87
Coloring options: