#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 5 61-62-33-5
1 IL_1NTA_0041NTA0.72082A+BRNA (22-mer) + RNA (18-mer)C18U19*A105C106A108G110cWWcWW
2 IL_4Y4O_2304Y4O0.000012A LSU rRNAU1415G1416*C1582A1583A1586A1587cWWcWWncSs
3 IL_5J7L_3015J7L0.68280180 degree turnDA LSU rRNAU1481G1482*C1507A1508A1509G1510cWWcWW
4 IL_5TBW_0365TBW0.72542180 degree turn1 LSU rRNAA1102G1104*C977G978A980U981cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CU*ACCACG1
UG*CACAA1
UG*CAAG1
AAG*CGUAU1
Non-Watson-Crick part of the motif
SequenceCounts
*CCAC1
*ACA1
*AA1
A*GUA1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.53
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • 180 degree turn (2)
  • Basepair signature
    cWW-R-R-cWW
    Heat map statistics
    Min 0.68 | Avg 0.59 | Max 0.92
    Help

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