Motif IL_67474.3 Version IL_67474.3 of this group appears in releases 3.54 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NTA_004 | 1NTA | 0.7255 | 2 | A+B | RNA (22-mer) + RNA (18-mer) | C | 18 | U | 19 | * | A | 105 | C | 106 | A | 108 | G | 110 | cWW | cWW | |
| 2 | IL_7RQB_054 | 7RQB | 0.0000 | 1 | 180 degree turn (H) | 1A | LSU rRNA | U | 1415 | G | 1416 | * | C | 1582 | A | 1583 | A | 1586 | A | 1587 | cWW | cWW |
| 3 | IL_5J7L_301 | 5J7L | 0.7181 | 0 | 180 degree turn | DA | LSU rRNA | U | 1481 | G | 1482 | * | C | 1507 | A | 1508 | A | 1509 | G | 1510 | cWW | cWW |
| 4 | IL_5TBW_036 | 5TBW | 0.7340 | 2 | 180 degree turn | 1 | LSU rRNA | A | 1102 | G | 1104 | * | C | 977 | G | 978 | A | 980 | U | 981 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CU*ACCACG | 1 |
| UG*CACAA | 1 |
| UG*CAAG | 1 |
| AAG*CGUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CCAC | 1 |
| *ACA | 1 |
| *AA | 1 |
| A*GUA | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (2)
- (1)
- 180 degree turn (H) (1)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.72 | Avg 0.59 | Max 0.92
Coloring options: