Motif IL_68597.1 Version IL_68597.1 of this group appears in releases 3.3 to 3.7
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-4 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_009 | 5J7L | 0.0000 | 0 | Isolated non-canonical cWW pair | AA | SSU rRNA | G | 128 | A | 129 | A | 130 | A | 131 | * | U | 231 | G | 232 | C | 233 | cWW | cWW | cWW | |
| 2 | IL_4RUM_002 | 4RUM | 0.6816 | 1 | A | NiCo riboswitch | U | 38 | G | 39 | C | 40 | G | 42 | * | C | 20 | A | 21 | A | 22 | cWW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAA*UGC | 1 |
| UGCAG*CAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*G | 1 |
| GCA*A | 1 |
- Annotations
-
- (1)
- Isolated non-canonical cWW pair (1)
- Basepair signature
- cWW-cWH-R-cWW-cWW
- Heat map statistics
- Min 0.68 | Avg 0.34 | Max 0.68
Coloring options: