#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 51-53-4
1 IL_4R4V_0054R4V0.00001Intercalated cWSAVS ribozyme RNAU719A720G722*C755A756cWWcWW
2 IL_1SI2_0021SI20.98451Isolated non-canonical cWW contactBRNA (9-mer)U403G404A405*U403||||4_675A405||||4_675cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAAG*CA1
UGA*UGA1
Non-Watson-Crick part of the motif
SequenceCounts
AA*1
G*G1

Release history

Release3.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW contact (1)
  • Intercalated cWS (1)
  • Basepair signature
    cWW-L-cWW
    Heat map statistics
    Min 0.98 | Avg 0.49 | Max 0.98
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1835 s