Motif IL_69000.1 Version IL_69000.1 of this group appears in releases 3.98 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9C2K_002 | 9C2K | 0.0000 | 0 | R | Rev Response Element | G | 9 | G | 10 | G | 11 | C | 12 | G | 13 | C | 14 | * | G | 30 | A | 31 | C | 32 | cWW | ncWW | cWW |
| 2 | IL_9C2K_001 | 9C2K | 0.3824 | 0 | C | Rev Response Element | G | 9 | G | 10 | G | 11 | C | 12 | G | 13 | C | 14 | * | G | 30 | A | 31 | C | 32 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGCGC*GAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCG*A | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Heat map statistics
- Min 0.38 | Avg 0.19 | Max 0.38
Coloring options: