Motif IL_74030.1 Version IL_74030.1 of this group appears in releases 3.15 to 3.16
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 4-8 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5XTM_006 | 5XTM | 0.0000 | 1 | D | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 13 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | cWw | cWW | ||
| 2 | IL_5XTM_002 | 5XTM | 0.8797 | 1 | Other IL | B | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 12 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | tSH | cBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUGAAA*UAACC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGAA*AAC | 2 |
- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-cWW-L-R-tSH-cWW-cWW
- Heat map statistics
- Min 0.88 | Avg 0.44 | Max 0.88
Coloring options: