Motif IL_74969.1 Version IL_74969.1 of this group appears in releases 3.2 to 3.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4IOA_023 | 4IOA | 0.7675 | 0 | X | LSU rRNA | U | 860 | G | 861 | * | U | 942 | U | 943 | A | 944 | cWW | cWW |
| 2 | IL_4V88_437 | 4V88 | 0.0000 | 5 | A6 | SSU rRNA | U | 1095 | G | 1101 | * | C | 1034 | G | 1035 | A | 1036 | cWW | cWW |
| 3 | IL_4V5O_128 | 4V5O | 0.1794 | 5 | BA | SSU rRNA | U | 1067 | G | 1073 | * | C | 1012 | G | 1013 | A | 1014 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUUGG*CGA | 2 |
| UG*UUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUG*G | 2 |
| *U | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.18 | Avg 0.38 | Max 0.78
Coloring options: