Motif IL_75000.1 Version IL_75000.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2AW7_039 | 2AW7 | 0.0000 | 0 | A | 16S ribosomal RNA | G | 774 | G | 775 | G | 776 | A | 777 | G | 778 | * | U | 804 | C | 805 | cWW | cWW | |
| 2 | IL_1FJG_032 | 1FJG | 0.0828 | 0 | Left turn (H) | A | SSU rRNA | G | 774 | G | 775 | G | 776 | A | 777 | G | 778 | * | U | 804 | C | 805 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAG*UC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGA* | 2 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_75000.1 | Only in the parent motif |
|---|---|---|---|
| IL_87744.2 Compare | IL_1FJG_032 | IL_2AW7_039 | IL_2ZJR_028, IL_3F1H_028 |
Children motifs
| Child motif | Common motif instances | Only in IL_75000.1 | Only in the child motif |
|---|---|---|---|
| IL_87173.1 Compare | IL_2AW7_039 | IL_1FJG_032 | IL_1U6B_009 |
| IL_52752.1 Compare | IL_1FJG_032 | IL_2AW7_039 |
- Annotations
-
- Left turn (H) (1)
- (1)
- Basepair signature
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: