#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 71-31-72-42-64-75-6
1 IL_1FJG_0321FJG0.00000Left turn (H)A SSU rRNAG774G775G776A777G778*U804C805cWWcWW
2 IL_2ZJR_0282ZJR1.15822C-loop (H)X LSU rRNAG877C878A879C880U881*A921C924ntSWcWWncSHtWHcWScWW
3 IL_3F1H_0283F1H1.18922A23S RRNAG864C865A866C867U868*A909C912tSWcWWtWHncWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCACU*AAAC2
GGGAG*UC1
Non-Watson-Crick part of the motif
SequenceCounts
CAC*AA2
GGA*1

Release history

Release0.20.30.4
Date2011-12-082011-12-082011-12-08
StatusUpdated, 2 parentsExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_87744.2Only in the parent motif
IL_87744.1
Compare
IL_2ZJR_028, IL_3F1H_028IL_1FJG_032IL_1FJG_047
IL_44199.1
Compare
IL_1FJG_032IL_2ZJR_028, IL_3F1H_028

Children motifs

Child motifCommon motif instancesOnly in IL_87744.2Only in the child motif
IL_68930.1
Compare
IL_2ZJR_028IL_1FJG_032, IL_3F1H_028IL_2XZM_022, IL_3PYO_047, IL_2QBG_033, IL_1S72_051, IL_3O30_023, IL_2QBG_050, IL_3O58_079, IL_1S72_091, IL_1FJG_015, IL_2ZJR_096, IL_1KOG_008, IL_1KOG_006, IL_1KOG_007, IL_1KOG_004, IL_1KOG_005, IL_1KOG_002, IL_2AW7_018, IL_1KOG_001, IL_2QBG_102
IL_75000.1
Compare
IL_1FJG_032IL_2ZJR_028, IL_3F1H_028IL_2AW7_039
Annotations
  • Left turn (H) (1)
  • C-loop (H) (1)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.16 | Avg 0.56 | Max 1.19
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