Motif IL_75101.1 Version IL_75101.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J7P_141 | 3J7P | 0.0000 | 1 | 5 | LSU rRNA | G | 4891 | A | 4892 | A | 4893 | C | 4895 | G | 4896 | * | C | 4924 | U | 4925 | C | 4926 | G | 4927 | C | 4928 | cWW | ncWH | cWW | |
| 2 | IL_4Z31_001 | 4Z31 | 0.9144 | 0 | D+C | RNA (15-mer) | C | 6 | U | 7 | G | 8 | U | 9 | G | 10 | * | C | 6 | U | 7 | G | 8 | U | 9 | G | 10 | cWW | ncwW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACG*CUCGC | 1 |
| CUGUG*CUGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAC*UCG | 1 |
| UGU*UGU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-L-cWW-cWW
- Heat map statistics
- Min 0.91 | Avg 0.46 | Max 0.91
Coloring options: