Motif IL_75392.1 Version IL_75392.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-14 | 2-15 | 3-13 | 6-9 | 7-8 | 7-12 | 11-12 | 11-13 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V5O_125 | 4V5O | 0 | 1 | BA | SSU rRNA | U | 871 | A | 872 | G | 873 | U | 874 | C | 875 | A | 876 | G | 877 | * | C | 888 | U | 889 | U | 890 | G | 892 | A | 893 | U | 894 | U | 895 | U | 896 | A | 897 | cWW | ncWW | ncWW | ntWH | ntSS | cWW | tSS | ncSH | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGUCAG*CUUGGAUUUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUCA*UUGGAUUU | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-L-R-R-R-L-L-L-L-tSS-R-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: