Motif IL_76319.3 Version IL_76319.3 of this group appears in releases 3.91 to 3.92
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 3-6 | 4-5 | 4-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_438 | 8P9A | 0.1564 | 1 | sR | SSU rRNA | U | 1272 | G | 1273 | A | 1275 | U | 1276 | * | A | 1436 | U | 1437 | G | 1438 | cWW | ncWS | cWW | ||
| 2 | IL_8C3A_456 | 8C3A | 0.1143 | 1 | CM | SSU rRNA | U | 1257 | G | 1258 | A | 1260 | U | 1261 | * | A | 1422 | U | 1423 | G | 1424 | cWW | ncWS | cWW | ||
| 3 | IL_4LFB_044 | 4LFB | 0.0000 | 1 | Isolated cWS basepair | A | SSU rRNA | U | 1052 | G | 1053 | A | 1055 | U | 1056 | * | A | 1204 | U | 1205 | G | 1206 | cWW | ncWS | cWW | |
| 4 | IL_6CZR_154 | 6CZR | 0.1766 | 1 | 1a | SSU rRNA | U | 1035 | G | 1036 | A | 1038 | U | 1039 | * | A | 1186 | U | 1187 | G | 1188 | cWW | ncWS | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGCAU*AUG | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCA*U | 4 |
- Annotations
-
- (3)
- Isolated cWS basepair (1)
- Basepair signature
- cWW-L-cWS-cWW
- Heat map statistics
- Min 0.11 | Avg 0.13 | Max 0.23
Coloring options: