Motif IL_79260.1 Version IL_79260.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1KD5_001 | 1KD5 | 0.0000 | 0 | tSH-tHW-tWH-tHS | A+B | RNA (11-mer) | U | 3 | C | 4 | A | 5 | C | 6 | A | 7 | G | 8 | * | U | 3 | C | 4 | A | 5 | C | 6 | A | 7 | G | 8 | cWW | tSH | tHW | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCACAG*UCACAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CACA*CACA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tSH-tHW-tWH-tHS (1)
- Basepair signature
- cWW-tSH-tHW-tWH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: