Motif IL_80581.1 Version IL_80581.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_102 | 8C3A | 0.0000 | 1 | 1 | LSU rRNA | C | 2422 | A | 2423 | U | 2424 | G | 2425 | G | 2426 | * | U | 2477 | A | 2478 | U | 2479 | G | 2481 | cWW | cWW | ||
| 2 | IL_8C3A_009 | 8C3A | 0.6207 | 0 | 1 | LSU rRNA | G | 161 | U | 162 | A | 163 | U | 164 | C | 165 | * | G | 256 | U | 257 | U | 258 | C | 259 | cWW | cwW | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUGG*UAUAG | 1 |
| GUAUC*GUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUG*AUA | 1 |
| UAU*UU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Heat map statistics
- Min 0.62 | Avg 0.31 | Max 0.62
Coloring options: