Motif IL_80925.1 Version IL_80925.1 of this group appears in releases 3.20 to 3.26
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2OZB_001 | 2OZB | 0.0000 | 1 | Single bulged A | C | RNA comprising the 5' Stem-Loop RNA of U4snRNA | U | 24 | G | 26 | * | C | 47 | G | 48 | cWW | cWW |
| 2 | IL_5TBW_018 | 5TBW | 0.8412 | 1 | Single bulged A | 1 | LSU rRNA | C | 577 | G | 579 | * | U | 512 | G | 513 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CG | 1 |
| CAG*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 2 |
Release history
| Release | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 |
|---|---|---|---|---|---|---|---|
| Date | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Single bulged A (2)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: