Motif IL_83121.1 Version IL_83121.1 of this group appears in releases 3.12 to 3.14

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name for chain		1		2	break		3		4		5	1-2	1-5	2-3	3-5
1	IL_1XJR_004	1XJR	0.7491	1	180 degree turn	A	s2m RNA	G	19	C	20	*	G	28	A	29	C	31	ncsS	cWW	cWW	ncsS
2	IL_4LFB_012	4LFB	0.0000	1		A	SSU rRNA	A	274	G	275	*	U	249	A	250	U	252		cWW	cWW
3	IL_5Y58_001	5Y58	0.3767	1		X	TLC1	U	308	G	309	*	U	291	A	292	A	294		cWW	cWW
4	IL_5J7L_015	5J7L	0.6361	1		AA	SSU rRNA	A	274	G	275	*	U	249	A	250	U	252		cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AG*UAGU	2
GC*GAUC	1
UG*UAUA	1

Non-Watson-Crick part of the motif

Sequence	Counts
*AU	2
*AG	2

Release history

Release	3.12	3.13	3.14
Date	2018-11-16	2018-12-14	2019-01-11
Status	New id, > 2 parents	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
180 degree turn (1)
Basepair signature: cWW-cSS-R-cWW
Heat map statistics: Min 0.38 | Avg 0.54 | Max 0.97

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