Motif IL_83121.4 Version IL_83121.4 of this group appears in releases 3.19 to 3.32
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-2 | 1-5 | 2-3 | 3-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1XJR_004 | 1XJR | 0.7491 | 1 | 180 degree turn | A | s2m RNA | G | 19 | C | 20 | * | G | 28 | A | 29 | C | 31 | ncsS | cWW | cWW | ncsS |
| 2 | IL_4LFB_012 | 4LFB | 0.0000 | 1 | A | SSU rRNA | A | 274 | G | 275 | * | U | 249 | A | 250 | U | 252 | cWW | cWW | |||
| 3 | IL_5J7L_015 | 5J7L | 0.6361 | 1 | AA | SSU rRNA | A | 274 | G | 275 | * | U | 249 | A | 250 | U | 252 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AG*UAGU | 2 |
| GC*GAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AG | 2 |
| *AU | 1 |
Release history
| Release | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- 180 degree turn (1)
- Basepair signature
- cWW-cSS-R-cWW
- Heat map statistics
- Min 0.64 | Avg 0.52 | Max 0.97
Coloring options: