Motif IL_83121.5 Version IL_83121.5 of this group appears in releases 3.33 to 3.45
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_015 | 5J7L | 0.6361 | 1 | AA | SSU rRNA | U | 249 | A | 250 | U | 252 | * | A | 274 | G | 275 | cWW | cWW |
| 2 | IL_4LFB_012 | 4LFB | 0.0000 | 1 | A | SSU rRNA | U | 249 | A | 250 | U | 252 | * | A | 274 | G | 275 | cWW | cWW |
| 3 | IL_4V9F_016 | 4V9F | 0.4937 | 1 | 0 | LSU rRNA | A | 602 | A | 603 | C | 605 | * | G | 554 | U | 555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGU*AG | 2 |
| AAGC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG* | 3 |
Release history
| Release | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.49 | Avg 0.42 | Max 0.76
Coloring options: