Motif IL_83121.6 Version IL_83121.6 of this group appears in releases 3.46 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-2 | 1-5 | 2-3 | 3-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1XJR_004 | 1XJR | 0.7491 | 1 | 180 degree turn | A | s2m RNA | G | 19 | C | 20 | * | G | 28 | A | 29 | C | 31 | ncsS | cWW | cWW | ncsS |
| 2 | IL_4LFB_012 | 4LFB | 0.0000 | 1 | A | SSU rRNA | A | 274 | G | 275 | * | U | 249 | A | 250 | U | 252 | cWW | cWW | |||
| 3 | IL_5J7L_015 | 5J7L | 0.6361 | 1 | AA | SSU rRNA | A | 274 | G | 275 | * | U | 249 | A | 250 | U | 252 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AG*UAGU | 2 |
| GC*GAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AG | 2 |
| *AU | 1 |
Release history
| Release | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- 180 degree turn (1)
- Basepair signature
- cWW-cSS-R-cWW
- Heat map statistics
- Min 0.64 | Avg 0.52 | Max 0.97
Coloring options: