Motif IL_83389.1 Version IL_83389.1 of this group appears in releases 3.91 to 3.94

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2	break		3		4	1-4	2-3
1	IL_8P9A_320	8P9A	0.4196	3	Major groove platform with intercalation (H)	AR	LSU rRNA	G	2396	A	2398	*	U	2981	C	2984	cWW	cWW
2	IL_4V9F_073	4V9F	0.0000	3		0	LSU rRNA	A	2095	G	2097	*	C	2647	U	2650	cWW	cWW
3	IL_4WF9_079	4WF9	0.1046	3		X	LSU rRNA	A	2081	G	2083	*	C	2639	U	2642	cWW	cWW
4	IL_5J7L_321	5J7L	0.1590	3		DA	LSU rRNA	A	2054	G	2056	*	C	2612	U	2615	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
ACG*CUAU	2
GAA*UACC	1
AAG*CUAU	1

Non-Watson-Crick part of the motif

Sequence	Counts
C*UA	2
A*AC	1
A*UA	1

Release history

Release	3.91	3.92	3.93	3.94
Date	2024-12-04	2025-01-01	2025-01-29	2025-02-26
Status	New id, 1 parent	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Major groove platform with intercalation (H) (1)
Basepair signature: cWW-cWW
Heat map statistics: Min 0.10 | Avg 0.22 | Max 0.48

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